Generates methylation bias plots from alignments
meta{:bash}
:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]
bam{:bash}
:file
BAM/CRAM file
*.{bam,cram}
meta2{:bash}
bai{:bash}
BAM/CRAM index file
*.{bai,crai}
meta3{:bash}
fasta{:bash}
Input genome fasta file
*.{fasta,fa}
meta4{:bash}
fai{:bash}
FASTA index file
*.{fai}
txt{:bash}
*.mbias.txt{:bash}
Text file containing methylation bias
*.{txt}
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
Read position methylation bias tools from MethylDackel, a (mostly) universal extractor for methyl-seq experiments.
