Builds bowtie index for reference genome
meta{:bash}
:map
Groovy Map containing reference information e.g. [ id:‘test’, single_end:false ]
fasta{:bash}
:file
Input genome fasta file
index{:bash}
bowtie2{:bash}
Bowtie2 genome index files
*.bt2
versions{:bash}
versions.yml{:bash}
File containing software versions
versions.yml
Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences.
